Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCATGCAGCTGTT
..((((((((((((((.....&))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015032
GeneSymbolPDS5B
Binding site3082,3098
Score0.846
Seed1
Au0.588
Energy-21.2
Binding len16
Me-4.957
Phylopstem5.09582156
Phylopflank5.039062250000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure