Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACGTTTCATGTCAGGC
.((((((((..(((((((....&)))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015035
GeneSymbolZHX3
Binding site3872,3890
Score0.923
Seed1
Au0.485
Energy-19.3
Binding len18
Me-7.861
Phylopstem-0.183818425
Phylopflank-0.21146277000000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure