Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCAACCGGGAGCTCCTGCAGG
((((((((.(((((((.(((.&))).)))))))..))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015035
GeneSymbolZHX3
Binding site2928,2953
Score0.923
Seed1
Au0.485
Energy-21.8
Binding len25
Me-4.994
Phylopstem0.18446862727272728
Phylopflank0.19075580749999996
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure