Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGCTACATGTTTTATTTCTTCATCGTGTTCACCACTGTATGCCAAGGC
.(((((((((((.((..((...&.))..)).))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015040
GeneSymbolPIKFYVE
Binding site6531,6580
Score1.0
Seed1
Au0.588
Energy-18.0
Binding len21
Me-5.316
Phylopstem0.39690575
Phylopflank0.5498880375000001
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end3
Position3UTR
2D Structure