Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCAGCAAACAGTTGTGCTGCAGG
(((((((.(((((((((((((&)))))))))).......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015040
GeneSymbolPIKFYVE
Binding site3161,3189
Score0.923
Seed1
Au0.515
Energy-20.3
Binding len28
Me-6.251
Phylopstem0.79465068
Phylopflank2.3293758425
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure