Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGAGGCGGAGGCTGCAGT
((((((((.((.((.(.((((&)))).).)).))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015040
GeneSymbolPIKFYVE
Binding site7736,7759
Score0.923
Seed1
Au0.456
Energy-20.2
Binding len23
Me-9.076
Phylopstem0.032467462499999995
Phylopflank0.08213769000000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure