Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGAGTGTCAGGC
.((((((((....((((((...&))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015041
GeneSymbolCLUAP1
Binding site762,779
Score0.846
Seed1
Au0.544
Energy-18.6
Binding len17
Me-12.497
Phylopstem5.415649375000001
Phylopflank5.011132637500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure