Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGTAGCAGCGT
.(((.(((((((((((.....&))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015042
GeneSymbolZNF609
Binding site4394,4410
Score1.0
Seed0
Au0.324
Energy-20.3
Binding len16
Me-7.912
Phylopstem3.2932800909090916
Phylopflank3.1750232250000003
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end3
PositionCDS
2D Structure