Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTCAAGTTTATAATCAATTCCCACTTAGCACCTACTGTGTGCTAGGA
.(((((((((((..((((....&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015044
GeneSymbolGGA2
Binding site3119,3169
Score1.0
Seed1
Au0.603
Energy-21.5
Binding len17
Me-5.939
Phylopstem0.23235778181818184
Phylopflank0.06275228000000001
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure