Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCGCAGCTGCAAA
(((((((((((((........&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015046
GeneSymbolSETX
Binding site3135,3149
Score1.0
Seed1
Au0.588
Energy-22.7
Binding len14
Me-5.763
Phylopstem-0.48194753846153837
Phylopflank-0.0856750625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure