Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCAATGCAGCTGTT
..((((((((.((((.(((((&))))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015046
GeneSymbolSETX
Binding site6204,6223
Score0.954
Seed1
Au0.574
Energy-22.4
Binding len19
Me-8.015
Phylopstem0.8922619249999998
Phylopflank1.48971497375
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure