Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTCAGGCTGCCGCTGCAT
.((((((.((((((..(((((&)))))..)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015049
GeneSymbolTRAK2
Binding site34,55
Score0.846
Seed1
Au0.338
Energy-22.6
Binding len21
Me-7.075
Phylopstem0.9688198333333333
Phylopflank1.174806407016129
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end6
Position5UTR
2D Structure