Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGATCAAGTTAATCAGCTGCAGCATGAGCTATGCAAG
(((((((((((((((.(((((&))))).............))))))))))........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015049
GeneSymbolTRAK2
Binding site776,818
Score0.846
Seed1
Au0.603
Energy-20.9
Binding len42
Me-4.171
Phylopstem0.2009242260869565
Phylopflank0.14278118
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure