Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCACACCAGCGGCAGCATGCAT
.(((((((((.((((...((.&))....)))).))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015049
GeneSymbolTRAK2
Binding site524,546
Score0.923
Seed1
Au0.456
Energy-20.9
Binding len22
Me-6.851
Phylopstem0.8408553099999999
Phylopflank0.6751644512500001
Longest consecutive pairings5
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure