Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCTGCTTTTGTTTGTCGT
...(((((.((((.(((((((.&)))))))..)))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015050
GeneSymbolCMTR1
Binding site3653,3673
Score0.846
Seed0
Au0.603
Energy-14.8
Binding len20
Me-8.428
Phylopstem0.2563149142857143
Phylopflank0.12910328712500008
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure