Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCTGTAGCTGA
...(((((((((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015055
GeneSymbolSWAP70
Binding site4142,4156
Score0.923
Seed0
Au0.529
Energy-21.5
Binding len14
Me-6.515
Phylopstem-0.22019820769230775
Phylopflank-0.14423938625000005
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure