Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCAGGGTTTGTCAGT
..((((((.((..(((((((..&)))))))..)).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015056
GeneSymbolRRP1B
Binding site5011,5030
Score0.846
Seed1
Au0.618
Energy-19.2
Binding len19
Me-10.649
Phylopstem0.2856293285714286
Phylopflank0.24428368124999983
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure