Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACCAGTGTGCAGCTGGCAAA
(((((((((((.(((..((((&))))..)))..)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015058
GeneSymbolVWA8
Binding site3183,3207
Score0.923
Seed1
Au0.485
Energy-21.0
Binding len24
Me-7.517
Phylopstem3.4653093333333334
Phylopflank3.23250117375
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure