Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACATGGCATTGCAGCAGCAT
.(((.((((((((((((((((&))))))))....)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015060
GeneSymbolAVL9
Binding site1450,1475
Score0.923
Seed0
Au0.485
Energy-24.4
Binding len25
Me-7.912
Phylopstem6.199666200000001
Phylopflank5.4234922587500005
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure