Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGGCAGACGAAGTCCCCTAACTTCGCAGCTGA
...(((((((((..((.(((.&.))).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015061
GeneSymbolKDM4C
Binding site2103,2140
Score0.872
Seed0
Au0.471
Energy-20.8
Binding len18
Me-8.661
Phylopstem4.252459999999999
Phylopflank3.6111953143749997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure