Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCAGGACCGCCTGCTGCAC
.((((((.((((((.(((((.&))))..).))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015063
GeneSymbolSLC8A2
Binding site1697,1720
Score0.846
Seed1
Au0.353
Energy-24.1
Binding len23
Me-6.842
Phylopstem0.047166166666666655
Phylopflank-0.29532599625
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure