Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCCAATCATTATCAAATGTTCCTTCAGCCCTGCAGTTGCC
..(((((((((((((.((((.&.)))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353924
GeneSymbolARHGEF9
Binding site2742,2788
Score1.0
Seed1
Au0.574
Energy-24.2
Binding len21
Me-5.19
Phylopstem0.8454363866666667
Phylopflank1.072489905
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure