Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACACCCCCAACAACAGGCAGCAGCTGCT
..((((((((((.(((((((.&))))))).)).............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015073
GeneSymbolSIPA1L3
Binding site2635,2667
Score0.846
Seed1
Au0.441
Energy-25.1
Binding len32
Me-6.246
Phylopstem4.349774173913044
Phylopflank5.356364462500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure