Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCAGCGAGCAGCTGCGC
.(((((((((.((((...(((&)))..))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015073
GeneSymbolSIPA1L3
Binding site5812,5833
Score0.923
Seed1
Au0.368
Energy-24.0
Binding len21
Me-6.851
Phylopstem3.735427777777778
Phylopflank3.1641661875000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure