Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGCAGAACGGCCGCTCCTCTCTCGGTCCAGCTGCGAC
((((((((((((((((((((.&)))).......))))))))..............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015078
GeneSymbolMCF2L2
Binding site379,421
Score0.846
Seed1
Au0.382
Energy-22.9
Binding len42
Me-3.938
Phylopstem-0.1462760292682927
Phylopflank0.018152082499999986
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end7
Position5UTR
2D Structure