Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGTGTCCCTGAGTCTCCTTTCTGAGTGCAAGCTGCAC
.((((((((((.(((.((((.&.))))..))).)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015084
GeneSymbolMRPS27
Binding site2008,2049
Score0.846
Seed1
Au0.471
Energy-20.1
Binding len23
Me-7.373
Phylopstem3.9728226909090902
Phylopflank3.2077338425000006
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure