Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCCAATCATTATCAAATGTTCCTTCAGCCCTGCAGTTGCC
..(((((((((((((.((((.&.)))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353927
GeneSymbolARHGEF9
Binding site2779,2825
Score0.923
Seed1
Au0.574
Energy-24.2
Binding len21
Me-5.19
Phylopstem1.2124551333333333
Phylopflank1.31349579375
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure