Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGCAGCAGCCATAGCTGTG
..(((((((.((((((.....&.)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353927
GeneSymbolARHGEF9
Binding site4051,4074
Score0.846
Seed1
Au0.5
Energy-20.4
Binding len16
Me-6.2
Phylopstem6.993301428571428
Phylopflank4.925316125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure