Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACAGCCCCCGGGAGCTCCAGGATGAGGAGTCTGGCAGCTGCC
..((((((((((((((.((((&)))).))))))...........................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015086
GeneSymbolDDN
Binding site117,164
Score0.846
Seed1
Au0.368
Energy-25.5
Binding len47
Me-4.957
Phylopstem2.270304536585366
Phylopflank1.8405109797499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure