Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGGGCCTCGGCTGCAGG
(((((((((.((((.(((((.&))))).)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015089
GeneSymbolCUL9
Binding site100,121
Score0.846
Seed1
Au0.412
Energy-28.6
Binding len21
Me-5.916
Phylopstem2.7271534444444447
Phylopflank3.625583509999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure