Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAAAAGCCCATGGTTGCGGTTGCAT
.(((((((((((((((..(((&.))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015090
GeneSymbolNFASC
Binding site8215,8240
Score0.846
Seed1
Au0.471
Energy-18.6
Binding len21
Me-3.793
Phylopstem-0.08972934000000003
Phylopflank-0.217645205
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure