Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCTCATTCGAGTGATTCTTTACAACCGGACGCGGCTGGAC
.(.(((((((((((((((((.&.))))))))))....))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015090
GeneSymbolNFASC
Binding site1672,1716
Score0.808
Seed0
Au0.441
Energy-24.7
Binding len25
Me-5.351
Phylopstem4.602836957142857
Phylopflank4.4861939575
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure