Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTCAGAACATTCCAGAGAGCCCAGTGC
(((((((((((((((((((((.&))))).)))))......)).))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001353949
GeneSymbolSCN1A
Binding site1557,1588
Score0.923
Seed1
Au0.426
Energy-25.4
Binding len31
Me-3.938
Phylopstem0.23456683666666672
Phylopflank0.45840942875
Longest consecutive pairings5
Position of longest consecutive pairings26
Pairings in 3prime end7
PositionCDS
2D Structure