Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACTCAGAACTTGGAGCCAT
...(((((((.((((((((((.&))))))))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001353949
GeneSymbolSCN1A
Binding site4045,4066
Score1.0
Seed0
Au0.544
Energy-25.3
Binding len21
Me-9.339
Phylopstem-0.75486841
Phylopflank-0.18556015875000004
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure