Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCATTGTACCAGGC
.(((((..(((((((.(((...&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015092
GeneSymbolSMG1
Binding site2374,2390
Score0.923
Seed0
Au0.588
Energy-17.4
Binding len16
Me-7.884
Phylopstem0.4029202142857143
Phylopflank0.42569023250000004
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure