Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTATGCAACCGTGGCCCTGCAGT
(((((((((((((((((.(((&))).))))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015092
GeneSymbolSMG1
Binding site8294,8318
Score0.846
Seed1
Au0.5
Energy-24.9
Binding len24
Me-3.938
Phylopstem5.449978536842107
Phylopflank5.5660628475
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure