Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTAATTGGGCTGCAGCTGTT
..((((((((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353949
GeneSymbolSCN1A
Binding site947,970
Score0.923
Seed1
Au0.544
Energy-20.4
Binding len14
Me-5.925
Phylopstem-0.13717337166666665
Phylopflank3.822424999995466e-05
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure