Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGGGCCGGCAGCCGCT
..((.(((((((((.(((((.&))))).))))).)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015102
GeneSymbolNPHP4
Binding site4104,4124
Score0.846
Seed0
Au0.382
Energy-24.8
Binding len20
Me-9.811
Phylopstem2.2568957
Phylopflank1.3756543875
Longest consecutive pairings5
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure