Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCAGCCGCTCATCTCCAAGGCCTTTGAGATCATGTTGGCTGCGGG
(((((((((((((((...(((&)))..)))))))............................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015102
GeneSymbolNPHP4
Binding site4193,4242
Score0.923
Seed1
Au0.456
Energy-22.8
Binding len49
Me-4.171
Phylopstem1.9484573325581394
Phylopflank1.9689368537500005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure