Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCGTGTTCACACTATCATATTTTGTATGCCCTGGA
.((.((((((((((((((((..&))))))))..................))))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001353954
GeneSymbolSCN1A
Binding site10957,10996
Score0.846
Seed0
Au0.662
Energy-19.6
Binding len39
Me-6.825
Phylopstem2.9243520588235294
Phylopflank3.7818184249999995
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end6
Position3UTR
2D Structure