Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAGCAAGAGGAAGAATTCGGCCCCGCAGCTGCC
..((((((((((((((..((.&))..))))................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015110
GeneSymbolSMC5
Binding site185,220
Score0.846
Seed1
Au0.338
Energy-23.8
Binding len35
Me-4.957
Phylopstem0.4826789266666668
Phylopflank1.5729577349999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure