Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTCCAAAATAGCAGCTGG
...(((((((..(((.(((((&)))))..)))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015110
GeneSymbolSMC5
Binding site3562,3584
Score0.846
Seed0
Au0.662
Energy-19.2
Binding len22
Me-12.919
Phylopstem0.6785989
Phylopflank0.36717159499999996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure