Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGCAGCTGCGGGCTGAGCTGCTGCAGG
((((((((((((((((..(((&)))..))))))))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015111
GeneSymbolN4BP3
Binding site1662,1693
Score0.846
Seed1
Au0.309
Energy-23.6
Binding len31
Me-3.938
Phylopstem2.896140419999999
Phylopflank2.14927525625
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
PositionCDS
2D Structure