Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCAACATGGAGTTTACCTGTGACCACTGCCAGGG
.(((((((((((..((((((((&.)))))))).)))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015113
GeneSymbolZZEF1
Binding site5609,5645
Score0.923
Seed1
Au0.5
Energy-19.7
Binding len27
Me-5.939
Phylopstem5.355518437500001
Phylopflank3.781515995000001
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure