Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGGGCAATTGAGCTGTAT
.(((((((.(((((((..(((&)))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015116
GeneSymbolLRCH1
Binding site2839,2859
Score0.846
Seed1
Au0.515
Energy-18.9
Binding len20
Me-4.85
Phylopstem-0.007338000000000043
Phylopflank0.063143795
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure