Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAACCGTGGCGAGCGC
.(((.((((((((((((....&))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015117
GeneSymbolZC3H3
Binding site2069,2087
Score0.923
Seed0
Au0.382
Energy-22.2
Binding len18
Me-7.912
Phylopstem1.8658941333333334
Phylopflank1.51266642125
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure