Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGACAACTGGCACACCAGCTGTAAC
((((((((((((((((..(((&)))..)))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015120
GeneSymbolALMS1
Binding site3931,3959
Score0.846
Seed1
Au0.544
Energy-22.6
Binding len28
Me-3.938
Phylopstem-1.2045386818181818
Phylopflank-0.854499055
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure