Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAGAAAGATACTGCAGATTCCAGTGCTGCTGCTGCTGCAGA
(((((((.(((((.(((.((.&.))..))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015120
GeneSymbolALMS1
Binding site10306,10352
Score0.846
Seed1
Au0.485
Energy-22.3
Binding len23
Me-7.108
Phylopstem1.4829746
Phylopflank0.34184817500000003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure