Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGGTCTGCTGCTGCAT
.((((((.(((((((.((((.&)))))))..)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353954
GeneSymbolSCN1A
Binding site9163,9184
Score1.0
Seed1
Au0.515
Energy-20.7
Binding len21
Me-6.34
Phylopstem5.8139959999999995
Phylopflank3.20969397875
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure