Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTAATTGGGCTGCAGCTGTT
..((((((((((((.......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353954
GeneSymbolSCN1A
Binding site1174,1197
Score1.0
Seed1
Au0.544
Energy-20.4
Binding len14
Me-5.925
Phylopstem-0.10962026833333333
Phylopflank0.3518083287500001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure